reorg: rename library/runtime -> library/kernel (groundwork)

First step of splitting the runtime dumping ground. Pure directory rename
(git mv library/runtime library/kernel) + the six build.zig path references
repointed. The module is still named "runtime" for now; the next commits split
it into concern modules (ipc, memory, process, time, logging, file-system, ...),
dissolve system.zig, and delete the runtime aggregator.

The library/kernel name follows the kernel32 model: it is the userspace library
that wraps the private kernel ABI, distinct from system/kernel/ (the kernel).

zig build green.

library/kernel/time.zig

@@ -0,0 +1,169 @@
+//! The danos time interface — monotonic time, delays, and deadlines for user space.
+//!
+//! There is no time *service*: the kernel already owns the scheduling timer and
+//! surfaces it directly, so reading the clock is one system call (an `rdtsc` and a
+//! scale), never an IPC round trip (docs/timers.md explains why). This module is a
+//! thin, generic layer over the `clock`/`sleep`/`timer_bind` wrappers in `system.zig`
+//! — an ergonomic `Instant`/`Duration` front door, not new mechanism.
+//!
+//! It is **monotonic** time only: nanoseconds since boot, moving forward, no date or
+//! timezone. Wall-clock/calendar time is a separate user-space service (an RTC-backed
+//! CLOCK_REALTIME) layered on top later.
+
+const std = @import("std");
+const system = @import("system.zig");
+
+const nanos_per_micro: u64 = 1_000;
+const nanos_per_milli: u64 = 1_000_000;
+const nanos_per_second: u64 = 1_000_000_000;
+
+/// A span of time, held as nanoseconds. Constructors name their unit; accessors
+/// truncate toward zero. `ceilMillis` rounds *up*, since `sleep`/`after` land on the
+/// kernel's millisecond granularity and rounding down could return early.
+pub const Duration = struct {
+    ns: u64,
+
+    pub fn fromNanos(n: u64) Duration {
+        return .{ .ns = n };
+    }
+    pub fn fromMicros(n: u64) Duration {
+        return .{ .ns = n *| nanos_per_micro };
+    }
+    pub fn fromMillis(n: u64) Duration {
+        return .{ .ns = n *| nanos_per_milli };
+    }
+    pub fn fromSeconds(n: u64) Duration {
+        return .{ .ns = n *| nanos_per_second };
+    }
+
+    pub fn asNanos(d: Duration) u64 {
+        return d.ns;
+    }
+    pub fn asMicros(d: Duration) u64 {
+        return d.ns / nanos_per_micro;
+    }
+    pub fn asMillis(d: Duration) u64 {
+        return d.ns / nanos_per_milli;
+    }
+    pub fn asSeconds(d: Duration) u64 {
+        return d.ns / nanos_per_second;
+    }
+
+    /// Whole milliseconds, rounded up — the argument `sleep`/`after` pass the kernel.
+    /// A non-zero sub-millisecond duration becomes 1 ms rather than 0.
+    pub fn ceilMillis(d: Duration) u64 {
+        return (d.ns +| (nanos_per_milli - 1)) / nanos_per_milli;
+    }
+
+    pub fn plus(a: Duration, b: Duration) Duration {
+        return .{ .ns = a.ns +| b.ns };
+    }
+};
+
+/// A point on the monotonic clock — nanoseconds since boot. Compare and subtract
+/// instants to measure elapsed time; it never runs backward, so `since` is safe to
+/// saturate at zero rather than wrap.
+pub const Instant = struct {
+    ns: u64,
+
+    /// The span from `earlier` to `self`, saturating at zero if `earlier` is later
+    /// (which the monotonic clock should never produce, but callers may pass any pair).
+    pub fn since(self: Instant, earlier: Instant) Duration {
+        return .{ .ns = self.ns -| earlier.ns };
+    }
+
+    /// How long since this instant, sampled now.
+    pub fn elapsed(self: Instant) Duration {
+        return now().since(self);
+    }
+
+    /// This instant advanced by `d` (a deadline, `d` from here).
+    pub fn plus(self: Instant, d: Duration) Instant {
+        return .{ .ns = self.ns +| d.ns };
+    }
+
+    /// Whether the monotonic clock has reached this instant (used as a deadline).
+    pub fn reached(deadline: Instant) bool {
+        return now().ns >= deadline.ns;
+    }
+};
+
+/// The current monotonic time.
+pub fn now() Instant {
+    return .{ .ns = system.clock() };
+}
+
+/// Monotonic nanoseconds since boot — the raw `clock()` reading, for callers that
+/// want a plain integer instead of an `Instant`.
+pub fn monotonicNanos() u64 {
+    return system.clock();
+}
+
+/// Whether the monotonic clock is usable. The kernel returns 0 until the TSC is
+/// calibrated (`tsc_hz == 0`); a caller that needs real time can treat that as
+/// "unavailable" instead of assuming the clock advances.
+pub fn available() bool {
+    return system.clock() != 0;
+}
+
+/// Block the caller for at least `d`, rounded up to the kernel's millisecond
+/// granularity. For sub-millisecond precision the scheduler cannot express, use
+/// `spin`.
+pub fn sleep(d: Duration) void {
+    system.sleep(d.ceilMillis());
+}
+
+/// Block the caller for `ms` milliseconds — the coarse, allocation-free form.
+pub fn sleepMillis(ms: u64) void {
+    system.sleep(ms);
+}
+
+/// Busy-wait until `d` has elapsed, polling the monotonic clock. This burns the CPU
+/// on purpose, to hit sub-millisecond delays the scheduler's millisecond tick cannot.
+/// Prefer `sleep` for anything at or above a millisecond.
+pub fn spin(d: Duration) void {
+    const deadline = now().plus(d);
+    while (!deadline.reached()) {}
+}
+
+/// Arm a one-shot timer against `endpoint` (a handle from `ipc.createIpcEndpoint`):
+/// after `d` the kernel posts a timer notification (`ipc.Received.isTimer`) there.
+/// Unlike `sleep`, this does not block — a service can keep serving IPC on the same
+/// endpoint while the deadline is pending. Rounds `d` up to milliseconds; returns
+/// false if the timer could not be armed. See `system.timerOnce`.
+pub fn after(endpoint: usize, d: Duration) bool {
+    return system.timerOnce(endpoint, d.ceilMillis());
+}
+
+test "Duration unit conversions round toward zero" {
+    try std.testing.expectEqual(@as(u64, 1_000_000_000), Duration.fromSeconds(1).asNanos());
+    try std.testing.expectEqual(@as(u64, 1_500), Duration.fromNanos(1_500).asNanos());
+    try std.testing.expectEqual(@as(u64, 2), Duration.fromMillis(2).asMillis());
+    try std.testing.expectEqual(@as(u64, 1), Duration.fromNanos(1_999_999).asMillis());
+    try std.testing.expectEqual(@as(u64, 250), Duration.fromMicros(250).asMicros());
+}
+
+test "ceilMillis rounds up, and never turns a nonzero span into zero" {
+    try std.testing.expectEqual(@as(u64, 0), Duration.fromNanos(0).ceilMillis());
+    try std.testing.expectEqual(@as(u64, 1), Duration.fromNanos(1).ceilMillis());
+    try std.testing.expectEqual(@as(u64, 1), Duration.fromMillis(1).ceilMillis());
+    try std.testing.expectEqual(@as(u64, 2), Duration.fromNanos(nanos_per_milli + 1).ceilMillis());
+    try std.testing.expectEqual(@as(u64, 5), Duration.fromMillis(5).ceilMillis());
+}
+
+test "Instant arithmetic: since saturates, plus/reached form deadlines" {
+    const t0 = Instant{ .ns = 1_000 };
+    const t1 = Instant{ .ns = 4_000 };
+    try std.testing.expectEqual(@as(u64, 3_000), t1.since(t0).asNanos());
+    // earlier-than-self can't happen on a monotonic clock; saturate rather than wrap.
+    try std.testing.expectEqual(@as(u64, 0), t0.since(t1).asNanos());
+    const deadline = t0.plus(Duration.fromNanos(2_500));
+    try std.testing.expectEqual(@as(u64, 3_500), deadline.ns);
+}
+
+test "saturating arithmetic does not overflow at the u64 ceiling" {
+    const big = Duration.fromSeconds(std.math.maxInt(u64));
+    try std.testing.expectEqual(@as(u64, std.math.maxInt(u64)), big.asNanos());
+    const late = Instant{ .ns = std.math.maxInt(u64) };
+    try std.testing.expectEqual(@as(u64, std.math.maxInt(u64)), late.plus(Duration.fromSeconds(10)).ns);
+}