C6: update docs for the library/kernel + client split

Rewrote the repository-layout and driver-model docs to describe the new tree —
library/kernel (the kernel32-style system library: syscall surface split by
concern), library/device (mmio/model/pci/usb/acpi/driver/block), library/client
(display, input service clients), library/protocol (wire contracts) — and swept
the reference docs off the retired runtime shim:

  runtime.system.*  -> logging.* / time.* / process.* / memory.*
  runtime.dma.* / runtime.shared_memory.* / runtime.allocator -> memory.*
  runtime.ipc/process/time/service/Thread/block/display/input -> the module name
  runtime.device / runtime.device_manager -> driver
  library/runtime/<file>.zig -> its new home (kernel/ client/ device/)

docs/README.md (repository layout + source map), docs/driver-model.md (the module
graph + import lists), and the concern/reference docs (ipc, threading, timers,
logging, power, process-lifecycle, device-manager, display, vdso, sysv, drivers,
input, vfs-protocol, coding-standards, ...) now reflect the split. "runtime" that
remains is the userspace-library *concept*, which is still accurate.

The historical plan docs (display-plan, display-v2-plan, threading-plan) and the
zig-self-hosting design note are left as point-in-time snapshots.

docs/coding-standards.md

@@ -67,7 +67,7 @@ Three, and only three.
 
    **This exception is scoped to a file that *is* a foreign ABI, and nothing else.**
    danos has no such file today: the old `library/posix/` compatibility shim was retired
-   once its callers moved to the danos-native `runtime.fs`, since a hand-rolled POSIX
+   once its callers moved to the danos-native `file_system`, since a hand-rolled POSIX
    layer is premature until danos actually needs it (see
    [zig-self-hosting.md](zig-self-hosting.md)). The exception will apply again to the
    `std.os.danos` seam when danos becomes a real Zig target — that module *is* the C-ABI
@@ -141,8 +141,8 @@ single word or acronym needs no hyphen: `scheduler.zig`, `paging.zig`, `apic.zig
 conventions above — `snake_case` — because it's an identifier, not a filename.)
 
 **A sub-project's entry point repeats its directory's name** — `init/init.zig`,
-`runtime/runtime.zig`, `ps2-bus/ps2-bus.zig` — and the sub-project is addressed by the
-*directory* (`system/services/init`, `library/runtime`), with the repeated leaf
+`pci/pci.zig`, `ps2-bus/ps2-bus.zig` — and the sub-project is addressed by the
+*directory* (`system/services/init`, `library/device/pci`), with the repeated leaf
 resolving away. See the repository-layout section of [README.md](README.md).
 
 ## Named values, not magic numbers